Back

Journal of Magnetic Resonance Imaging

Wiley

Preprints posted in the last 30 days, ranked by how well they match Journal of Magnetic Resonance Imaging's content profile, based on 14 papers previously published here. The average preprint has a 0.03% match score for this journal, so anything above that is already an above-average fit.

1
Choroid plexus calcification detection using quantitative susceptibility mapping MRI

Hett, K.; Dubois, A.; Bonitz, I.; Considine, C. M.; Eaton, J.; Mcknight, C. D.; Claassen, D. O.; Donahue, M. J. J.; Trujillo, P.

2026-05-28 radiology and imaging 10.64898/2026.05.26.26354154 medRxiv
Top 0.1%
22.0%
Show abstract

Purpose. The choroid plexus (ChP) is the primary source of cerebrospinal fluid and an emerging marker of cerebral health, with enlargement and hypoperfusion reported in aging and neurodegeneration. However, frequent ChP calcifications can confound volumetric and perfusion measures. Although computed tomography (CT) is the gold standard for detecting calcification, it is rarely available in research MRI. Quantitative susceptibility mapping (QSM) offers an alternative sensitive to diamagnetic mineralization but lacks validated susceptibility thresholds. Method. Participants underwent CT and MRI within four weeks, including 3D T1-weighted and a multi-echo gradient echo QSM MRI. ChP calcifications were identified on CT using standard diagnostic criteria. Using the Bayes decision boundary framework, we identified optimal susceptibility thresholds for detecting diamagnetic signals consistent with calcification and compared these thresholds with multiple density levels measured on gold standard CT images. Results. Across all participants (n=20; age=62.2+-12.0 yrs), the optimal susceptibility threshold separating background ChP signal from calcifications was -0.10 ppm at 60 HU (low-density) and -0.15 ppm at 100 HU (high-density). Susceptibility values within calcified tissue exhibited a linear relationship with CT-derived tissue density. A significant positive association was observed between ChP volume and calcification volume among participants with detectable calcification (beta=2.26, p=0.047). Conclusion. This work should provide a practical framework for quantifying ChP calcifications routinely from MRI. The observed relationship between ChP volume and calcification volume highlights the importance of accounting for calcified tissue, particularly when calcification burden is substantial, when investigating ChP abnormalities in aging and neurodegenerative disease.

2
RF Heating of Bipolar Epicardial Implants during MRI at 0.55 T and 1.5T: Effect of Device Length and Termination Conditions

Bhusal, B.; Sanpitak, P. P.; Jiang, F.; Webster, G.; Richardson, J.; Seiberlich, N.; Golestani Rad, L.

2026-05-29 biophysics 10.64898/2026.05.26.728047 medRxiv
Top 0.1%
18.4%
Show abstract

Pediatric patients with epicardial cardiac implantable electronic devices (CIEDs) are frequently excluded from the Magnetic Resonance Imaging (MRI) primarily due to RF heating safety concerns. In this study we evaluate RF heating of two bipolar epicardial leads during MRI at 0.55 T and 1.5 T under different termination conditions. Our findings showed that the mean RF heating was significantly reduced at 0.55 T MRI compared to that at 1.5 T. Similarly, the RF heating at 0.55 T MRI was highest for full system whereas, during MRI at 1.5 T, the RF heating was highest for the capped abandoned lead, showing dependence of RF heating pattern on MRI field strength. While RF heating at both fields surpassed the safety limit, the capped abandoned leads at 1.5 T MRI showed significantly higher RF heating with temperature rise surpassing 50{degrees}C in some of the cases. These results highlight the difference in RF heating of bipolar epicardial leads compared to the previously reported findings for monopolar epicardial lead which showed smallest heating for capped abandoned lead at both field strengths. These findings emphasize the necessity of device-specific evaluations at each field-strength to inform clinical decision-making and expand MRI access for this vulnerable population.

3
The impact of B1+ inhomogeneity on image quality metrics and morphometric statistical inferences at 7 T MRI

Liu, K.; Uludag, K.; de Coo, I. F. M.; Smeets, H. J. M.; Jansen, J. F. A.; Formisano, E.; Poser, B. A.; Haast, R. A. M.; Ivanov, D.

2026-06-09 radiology and imaging 10.64898/2026.06.08.26355136 medRxiv
Top 0.1%
17.9%
Show abstract

Introduction: Structural neuroimaging relies on T1-weighted (T1w) magnetic resonance imaging (MRI) for brain morphometry, yet at 7 Tesla (7 T) transmit field (B1+) inhomogeneity remains a major source of bias. Although Magnetization Prepared 2 Rapid Acquisition Gradient Echoes (MP2RAGE) improves the tissue contrast, residual B1+ effects may persist and may be exacerbated in aging or clinical populations, where anatomical and physiological factors further challenge image quality and preprocessing. The impact of B1+ inhomogeneity on automated quality assessment and morphometric statistical inference remains insufficiently understood. Methods: Submillimeter 7 T MP2RAGE brain acquisitions from carriers of a mitochondrial gene mutation (m.3243A>G) and controls were retrieved from previous studies. Image quality before and after B1+ inhomogeneity correction was assessed by multiple automated pipelines. Case-control morphometric studies, including regional volume and mean cortical thickness, were analyzed in both registration based and deep learning based segmentation frameworks. Changes in image quality metrics (IQMs) and morphometric statistical significance were evaluated to determine the impact of B1+ inhomogeneity correction. Results: Overall image quality rating and metrics sensitive to intensity non-uniformity and topological integrity consistently improved after B1+ inhomogeneity correction. However, its impact on morphometric statistical inferences was strongly method-dependent. Some pipelines showed redistribution of significant regions, whereas others predominantly demonstrated increased effects in sensitivity. Across methods, B1+ inhomogeneity correction altered the findings of morphometric analyses, particularly in cortical regions. Conclusion: Residual B1+ inhomogeneity at 7 T substantially influences both image quality control and morphometric evaluations. Current automated quality control approaches can hardly capture these effects reliably. B1+ inhomogeneity correction will not only improve intensity uniformity, but also change sensitivity of morphometric statistical inferences. To establish reliable morphometric biomarkers at UHF strengths, explicit B1+ correction and customized preprocessing are practically necessary and highly recommended.

4
Comparative Study on Image Quality of Deep Learning and Adaptive Statistical Iterative Reconstruction-V in Thin Layer CT of liver Lesions

Yang, J.; Li, L.; Cao, J.; Zhang, J.

2026-05-26 radiology and imaging 10.64898/2026.05.23.26353923 medRxiv
Top 0.1%
14.2%
Show abstract

Objective:This study aims to compare the advantages and disadvantages of DLIR and adaptive statistical iterative reconstruction-V (ASIR-V) in thin-slice (2.5 mm) CT images of hepatic lesions characterized by high and low contrast. Additionally, the study seeks to determine the optimal DLIR strength for the evaluation of liver lesions. Methods:A retrospective analysis was performed on 90 patients who underwent abdominal contrast-enhanced CT scans. Group A comprised 48 patients with low-contrast lesions, while Group B included 42 patients with high-contrast lesions. The acquired images were reconstructed using post-processing DLIR at low (DLIR-L), medium (DLIR-M), and high (DLIR-H) strengths, all with a slice thickness of 2.5 mm (subgroups A1-A3, B1-B3). Furthermore, images were reconstructed with ASIR-V at 50% strength at slice thicknesses of 2.5 mm and 5 mm (subgroups A4/B4 and A5/B5, respectively). CT values and standard deviations (SD) of the liver and lesions were measured, and the corresponding signal-to-noise ratio (SNR) and contrast-to-noise ratio (CNR) were calculated. The edge rise slope (ERS) was determined using ImageJ software by measuring CT values along a line from the liver parenchyma to the lesion. Objective metrics were compared using one-way ANOVA, with independent samples t-tests applied for inter-group differences. Subjective scoring, which encompassed noise level, diagnostic confidence, and lesion margin delineation, was conducted by two radiologists, with differences analyzed using the Kappa test. Results: Objective evaluation revealed a progressive decrease in lesion SD and a progressive increase in SNR and CNR from subgroups A1/B1 to A3/B3. The SD of Group A2 decreased by 57.4% compared to A4, while the SNR and CNR of A2 icreased by 19.3% and 24.6% compared to A4. Although subgroup B2 had a lower SNR than B5, the difference was not statistically significant. SNR and CNR in B2 increased by 24.1% and 11.9%, respectively, compared to B4. ERS gradually decreased from A1/B1 to A3/B3. ERS values in A2 and B2 increased by 27.0% and 39.4%, respectively, relative to A5 and B5. Although A3 had a lower ERS than A1 and A2, all DLIR subgroups exhibited higher ERS than A5; similar trends were observed in Group B. Subjective evaluation indicated good inter-reader agreement (Kappa > 0.61, p < 0.05). As DLIR strength increased, noise scores rose progressively in both groups. However, noise in A2 and B2 was lower than in A4/A5 and B4/B5. Diagnostic confidence and lesion margin delineation scores were highest in A2 and B2, while all subjective scores were lowest in A5 and B5. Discussion: Most prior studies evaluated the liver, vessels, or confirmed that image quality can be guaranteed at low doses. However, there are few studies on specific individual lesions. Therefore, this study aims to investigate specific individual lesions. The details and detection rate were analyzed separately to confirm the clinical acceptability of 2.5-mm DLIR image in different contrast lesions. Conclusion: For both high- and low-contrast hepatic lesions, DLIR provides superior image quality compared to ASIR-V, with the 2.5mm DLIR-M setting being optimal. DLIR-M reduces image noise, improves spatial resolution, and produces images more suitable for diagnostic purposes.

5
Concurrent tDCS-fMRI: Impact of the current-induced magnetic fields on the measured BOLD signal

Cunha, T.; Grundei, M.; Gregersen, F.; Nierhaus, T.; Hanson, L. G.; Blankenburg, F.; Thielscher, A.

2026-06-05 radiology and imaging 10.64898/2026.06.04.26354901 medRxiv
Top 0.1%
14.1%
Show abstract

Background: Understanding how transcranial direct current stimulation (tDCS) affects brain activity critically benefits from the use of functional magnetic resonance imaging (fMRI) to measure the related BOLD (blood-oxygenation-level-dependent) signal changes. However, the small magnetic fields induced by the stimulation currents can cause artifacts in the fMRI images that can compromise findings from concurrent tDCS-fMRI studies. Objective: To identify how the current-induced magnetic fields affect fMRI data and establish a quantitative framework for evaluating their impact on concurrent tDCS-fMRI measurements. Methods: Magnetic fields induced by currents inside the head and electrode cables were calculated for a standard motor cortex montage. Their effects on echo-planar images (EPI) were simulated based on a framework derived from MR physics first principles and validated using phantom experiments. The framework was applied to artificially induce artifacts related to the tDCS current flow in current-free fMRI time series from 5 participants. These were compared to active runs from the same participants where tDCS intensity was varied in a block design. Results: Currents in the electrode cables were the main contributors to the current flow-related artifacts in the EPI images, which occurred both locally by causing geometric distortions and remotely by affecting the dynamic update of the scanner demodulation frequency. The artificially induced fMRI activations corresponded well to those measured during real tDCS on the single-subject level for intensities of 2 mA and higher. Conclusion: The current-induced magnetic fields can cause intensity changes comparable to typical BOLD responses. Their impact on the statistical results depends on the chosen experimental design (electrode locations, cable paths, imaging parameters, fMRI paradigm). The simulation framework provides a principled approach to evaluate the impact of these artifacts during the design and data analyses of concurrent tDCS-fMRI studies.

6
Consensus-based technical recommendations for clinical translation of renal Dynamic Contrast-Enhanced (DCE) MRI

Gunwhy, E. R.; Kurugol, S.; Serai, S.; van der Molen, A. J.; Abou El-Ghar, M.; Buckley, D. L.; Hockings, P. D.; Jones, R. A.; Lim, R. P.; Mendichovszky, I. A.; Pedersen, M.; Reynolds, H. M.; Sanmiguel Serpa, L. C.; Wentland, A.; Zoellner, F. G.; Sourbron, S.; Dekkers, I. A.

2026-05-14 radiology and imaging 10.64898/2026.05.11.26352525 medRxiv
Top 0.1%
12.7%
Show abstract

BackgroundDynamic contrast-enhanced (DCE) MRI has the potential to be a useful tool for non-invasively assessing renal haemodynamics and function, however insufficient standardisation and difficulties in post-processing remain barriers to clinical translation. PurposeTo develop expert consensus-based technical recommendations for performing renal DCE-MRI in humans, relating to aspects of patient preparation, MRI hardware and acquisition parameters, and data analysis. Study TypeSystematic consensus process using an approximation to the two-step modified Delphi method. PopulationNot applicable. Field Strength / Sequence1.5 T and 3 T / Renal gradient echo-based 3D DCE-MRI. AssessmentAn international panel of experts were recruited and surveyed following a modified Delphi method to create consensus-based technical recommendations. Key areas for consensus were initially identified through a mixture of online and in-person discussions, and an initial survey round consisting of open- and close-ended questions. Consensus statements were formulated and iteratively refined to create the final recommendations. Statistical TestsConsensus was defined as [&ge;] 75% agreement in response (excluding abstentions), and clear preference was defined as [60-74]% agreement among the experts. Statements with [&ge;]40% abstentions were either excluded from subsequent survey rounds or recirculated as a modified statement. Results22 experts initially participated in the Delphi panel, of which 16 responded to the first survey. 15 panellists responded to all subsequent surveys. Out of 46 statements, 37 reached consensus and one showed clear preference. [&ge;]40% abstention was found in seven statements which were excluded from the final set of recommendations. Data conclusionThese recommendations provide a starting point for MRI centres worldwide wishing to perform renal DCE-MRI, contributing to the harmonisation of DCE-MRI scan protocols and facilitating clinical translation. These recommendations provide a practical minimum technical dataset for renal DCE-MRI acquisition and analysis to improve cross-site comparability and support responsible clinical translation.

7
Efficacy Validation of a Novel MRI-Based Whole-Body Rapid Bone Scan (WB-RBS) Strategy for Diagnosing Bone Metastases: A Prospective Trial

Wu, X.; Zhang, J.; He, Y.; Zhang, Y.; Kang, X.; Hu, W.; Li, Y.; Ma, H.; Wang, Y.; Song, Y.; Chen, X.; Huo, F.; Zhang, Y.; Yin, H.; Xi, Y.

2026-05-24 radiology and imaging 10.64898/2026.05.17.26352855 medRxiv
Top 0.1%
8.1%
Show abstract

Background: Traditional bone scintigraphy for detecting malignant bone metastases is limited by suboptimal accuracy and radiation exposure. Whole-body magnetic resonance imaging (WB-MRI), while an alternative, requires lengthy scan times and high patient compliance. Purpose: To develop a novel, rapid whole body bone screening (WB-RBS) MRI protocol and evaluate its diagnostic performance for bone metastasis detection. Materials and Methods: Patients with pathologically confirmed malignancies and healthy controls were prospectively enrolled. All participants underwent WB-RBS (acquisition time: about 10 min); patients additionally underwent WB-MRI (about 70 min). Three radiologists, blinded to clinical data, independently evaluated the images for bone metastases. A consensus expert diagnosis served as the reference standard to calculate the diagnostic performance of WB-RBS. Specificity was further assessed in the healthy control group. Results: Seventy patients and 19 healthy controls were included. WB-RBS demonstrated excellent inter-reader agreement at the patient level. Compared with the reference standard, WB-RBS achieved an accuracy of 77.1%-91.4% at the patient level and a slightly lower accuracy (70.6%-82.5%) at the lesion level. At diagnostic confidence thresholds 1-3, the correlations between WB-RBS ratings and the reference standard were statistically significant for both patient- and lesion-level analyses. Conclusion: WB-RBS showed favorable inter-reader agreement and high accuracy for bone metastasis screening at the patient level, while substantially reducing scan time and cost. Its rapid, radiation-free nature and high accessibility offer distinct clinical advantages, supporting its potential as an alternative screening tool to conventional bone scintigraphy.

8
MR-Guided PET Denoising and Resolution Enhancement Improves Visual Interpretation and Preserves Quantitative Behavior Across Amyloid Tracers

Szujewski, C.; Shepherd, T. M.; Ghesani, M.; Ponisio, M.; Lavely, W.; Schramm, G.; Bollack, A.; Ades-aron, B.; Lemberskiy, G.

2026-05-19 radiology and imaging 10.64898/2026.05.14.26353149 medRxiv
Top 0.1%
6.9%
Show abstract

Background: Amyloid-beta PET provides critical biomarker data for Alzheimer's disease diagnosis and anti-amyloid therapy evaluation, yet low spatial resolution and partial volume effects result in decreased interpretability, particularly in cases with low or borderline cortical amyloid burden. While quantitative metrics (SUVr, Centiloid) aid in interpretation of amyloid burden, disagreement between visual reads and quantitative burden does occur, further blurring the line between positive or negative scans. We evaluated whether a vendor-neutral MR-guided PET denoising and resolution enhancement method (MRG) that uses Bowsher regularization improves image interpretability and reader performance while preserving established quantitative biomarkers across multiple amyloid tracers, leading to increased concordance among visual reads and quantitative metrics. Methods: Standard (STN) and MRG PET images were compared for four tracers ([18F]AV-45 ([18F]florbetapir, FBP), [18F]florbetaben (FBB), [18F]flutemetamol (FMM), and [11C]Pittsburgh compound-B (PiB) collectively from 24 MRI and 33 PET scanners. Quantitative equivalence was assessed by comparing Standardized Uptake Value ratio (SUVr) and Centiloid scores. In three of the four tracers (FBP, FBB, FMM), visual-quantitative concordance (AUC) and reader performance were evaluated in a blinded multi-reader study by four highly experienced brain PET readers who assessed image quality, artifact severity, reader confidence, and binary amyloid positivity. Results: Across all tracers, MRG preserved quantitative SUVr and Centiloid metrics relative to STN (R2 >0.90 for all tracers) without introducing bias to the SUVr metric. Concordance between visual reads and quantitative burden measures significantly improved with MRG. In the multi-reader study, MRG resulted in significantly higher image quality, lower artifact burden, and greater reader confidence compared to STN (p < 0.0001). Reader accuracy increased from 0.89 to 0.94, and the false-negative rate decreased from 0.08 to 0.04. Crucially, improvements in reader confidence, accuracy, and the reduction in false negative reads were most pronounced in cases with low amyloid burden near the threshold of visual positivity. Conclusions: MRG denoising and resolution enhancement improved perceived image quality, reader confidence, and accuracy for amyloid PET while preserving standard quantitative behavior across tracers. By improving cortical definition in visually challenging low-burden cases without disrupting established SUVr/Centiloid behavior, MRG may reduce visual-quantitative discordance and support more confident amyloid PET interpretation near the threshold of positivity.

9
Singular Value Decomposition-Based Coil Combination Improves the Accuracy and Noise-Robustness of Quantitative Susceptibility Maps

Atkins, C.; Wu, T.; Bujak, B.; Inati, S.; Kellman, P.; Nair, G.

2026-06-05 radiology and imaging 10.64898/2026.05.28.26354148 medRxiv
Top 0.1%
6.5%
Show abstract

Most high-field MRI scanners conduct imaging using phased-array coils, in which the signals received by an array of coil elements are combined for downstream processing. Optimally combining these signals requires knowledge of each coil's spatial sensitivity profile, which can be acquired from a volume coil with homogeneous sensitivity across the field-of-view. However, this approach is not often used on high-field MRI scanners, especially on non-clinical systems; therefore, this work uses an algorithm based on the singular-value decomposition (SVD), called SVD-B1, to estimate coil sensitivities directly from the array data itself. Images produced by SVD-B1 are devoid of wormhole artifacts and open-ended fringe lines commonly seen in more conventional reconstructions. Quantitative Susceptibility Maps (QSMs) produced using the algorithm were compared to those produced using other combination algorithms across clinically relevant regions of in-vivo and postmortem human brains. As progressive levels of simulated noise were added to the data, SVD-B1's QSMs were up to 3% (in-vivo) and 13% (postmortem) more consistent (as measured by their Intraclass Correlation Coefficient) than those from other algorithms. Additionally, these QSMs were up to 8.5% (in-vivo) and 36% (postmortem) more accurate than other QSMs with respect to a "single-coil" reference. A parallel imaging extension of SVD-B1, called SVD-B1 GRAPPA, achieved similar results for QSMs generated from progressively more accelerated acquisition data. These results show that SVD-B1 can improve the sensitivity of high-resolution QSM to subtle changes in fine-grained tissue structures (e.g., in neurodegenerative disease) and help reduce scan times in clinical settings where shorter scans are imperative.

10
Software-defined Radar for MRI Motion Correction: A versatile, vendor-independent Platform

Maier, C.; Solomon, E.; Verghese, G.; Chandarana, H.; Block, K.-T.; Alon, L.

2026-05-21 radiology and imaging 10.64898/2026.05.16.26351399 medRxiv
Top 0.1%
6.4%
Show abstract

Purpose: To develop and evaluate a flexible, software-defined radar platform for contactless, vendor-independent motion detection and correction in MRI. Methods: A continuous-wave (CW) Doppler radar was implemented using a software-defined radio and the open-source GNU Radio framework. The system was deployed inside a 1.5T MRI scanner and synchronized with MRI acquisitions. We evaluated the performance in a custom-developed internal motion phantom and in healthy volunteers to track respiration and bulk motion. The radar-derived signal was validated against cine MRI and used to demonstrate both retrospective and prospective motion management techniques in phantom and in healthy volunteers. Results: The radar provided robust motion signals that correlated strongly with image-based ground truth signals in both phantom and volunteer experiments. Signal characteristics were found to be frequency-dependent, enabling optimization for different motion regimes. Retrospective correction of free-breathing abdominal data using the radar signal effectively suppressed respiratory artifacts, achieving image quality comparable to a self-gating approach. Prospective triggering successfully reduced motion artifacts in the phantom study. The system also reliably detected sporadic events such as swallowing during neck imaging. Conclusion: Software-defined radar was demonstrated to be an effective platform for both prospective and retrospective motion correction. Its independence from the MRI system, ultra-wide band capabilities, and body-region versatility enable the adaptation of the technique for a wide range of imaging applications and protocols.

11
Automated assessment of neonatal internal capsule maturation on T2-weighted MRI across 7T and 3T

Casella, C.; Uus, A.; Dedominicis, L.; Willers Moore, J.; Clayden, B.; Galanides, E.; Bridgen, P.; Di Cio, P.; Tomazinho, I.; Da Costa, C.; Gallo, D.; Arulkumaran, S.; Deprez, M.; Counsell, S. J.; Edwards, A. D.; Hajnal, J. V.; O'Muircheartaigh, J.; Rutherford, M. A.; Malik, S.; Arichi, T.

2026-06-03 radiology and imaging 10.64898/2026.06.02.26354741 medRxiv
Top 0.1%
6.3%
Show abstract

Motivation: Quantitative assessment of neonatal internal capsule (IC) maturation remains largely reliant on qual- itative visual evaluation, limiting objectivity and scalability. Approach: We developed a fully automated 3D deep learning framework for anatomically detailed segmentation of IC subregions and PLIC myelin-related signal from structural T2-weighted MRI, trained on both high-resolution 7T and conventional 3T neonatal datasets. Volumetric and intensity-based metrics were derived, and developmental trajectories were modelled using postmenstrual age (PMA) and postnatal age (PNA), with normative modelling used to quantify individual deviations. Results: The pipeline achieved high segmentation accuracy across field strengths (Dice > 0.95, relative volume difference < 5%). IC metrics showed robust age-related changes, with volumetric measures increasing and intensity- based measures decreasing with PMA. PNA effects indicated prematurity-related modulation at equivalent maturational age. These patterns generalized to 3T, where normative modelling revealed significant deviations in preterm infants, particularly for myelin-related intensity measures. Conclusion: Structural T2-weighted MRI, combined with anatomically informed segmentation, enables quantitative and biologically meaningful assessment of neonatal IC maturation. This provides a scalable framework for studying early white matter development and supports potential clinical translation.

12
Toward Large-Scale Preclinical Neuroimaging: Quantifying Inter-Scanner Variability in Mouse Brain MRI

Shahid, M.; Zhang, J.

2026-06-02 bioengineering 10.64898/2026.05.29.728711 medRxiv
Top 0.1%
6.3%
Show abstract

Multi-site MRI studies in preclinical neuroimaging are emerging, but unlike in human studies, characterization of inter-scanner variability remains limited. In this study, we assessed intra- and inter-scanner variability between two similarly equipped 7 Tesla MRI scanners using a phantom and ex vivo mouse brain specimens. Diffusion-weighted imaging revealed slight differences in gradient amplitudes between the scanners, while estimated apparent diffusion coefficient (ADC) values showed a coefficient of variation below 1.5% and inter-scanner differences below 2% near the magnet center. Volumetric analysis based on proton density-weighted images showed negligible intra-scanner differences across sessions, while inter-scanner volumetric differences were mostly less than 2% and spatially non-uniform across the brain. Quantitative maps of R1, R2*, and MTsat showed inter-scanner relative differences of less than 5%, 10%, and 20%, respectively, with white matter exhibiting greater variability than gray matter. These findings provide a foundation for future large-scale, multi-scanner preclinical neuroimaging studies.

13
Economic costing of evaluating, deploying and monitoring an artificial intelligence-based reconstruction for acceleration of rectal MRI examinations

Harrison, C. A.; Wu, M.; White, O.; Hopkinson, G.; Hughes, J.; Robertson, S.; Scurr, E.; Shur, J.; Castagnoli, F.; Charles-Edwards, G.; Koh, D.-M.; Winfield, J.

2026-05-21 radiology and imaging 10.64898/2026.05.18.26353474 medRxiv
Top 0.1%
5.0%
Show abstract

Objectives: AI-based reconstructions can reduce MRI acquisition times and/or improve image quality. Guidelines recommend clinical evaluations and post-deployment monitoring of these novel methods, however, there has been little investigation of the clinical resources required for such assessments. The aim of this study was to evaluate the healthcare resource utilisation and potential savings associated with AI-based reconstructions in rectal MRI. Methods: A retrospective economic costing analysis was conducted from the NHS healthcare perspective. Resource utilisation data were extracted from the Electronic Patient Records for 9 healthy volunteer scans and 104 rectal MRI examinations evaluating an AI-based reconstruction. The resource profile included the MRI scan and the staff time required for data acquisition and analysis. Results: The clinical evaluation of the AI-based reconstruction cost {pound}15,023. Deployment of the AI-based reconstruction reduced the length of an MRI rectum scan by 22 minutes, theoretically saving approximately {pound}3,437 per month. Addition of post-deployment quality control scans reduced this monthly saving to {pound}2,636. If the quality control scans were evaluated using radiologists rather than image quality metrics, monthly savings would be approximately {pound}2,541. With ongoing quality control, the clinical evaluation cost would be recouped between 5.8 and 6 months, compared with 4.4 months without ongoing quality control. Conclusions: Deploying AI-based reconstructions can yield cost savings through reduced scanning times. Quality control tests using image quality metrics would save radiological burden and reduce costs compared with conducting repeated image scoring by radiologists.

14
Determinants and propagation of velocity uncertainty in 2D phase-contrast MRI

Rodriguez-Soto, A. E.; Schuchardt, E. L.; Narayan, H. K.; Printz, B. F.; Hegde, S.; Hopkins, S. R.; Contijoch, F.

2026-06-04 radiology and imaging 10.64898/2026.06.01.26353730 medRxiv
Top 0.1%
4.9%
Show abstract

Purpose: To quantify the contributions of signal-to-noise ratio (SNR) and velocity-to-encoding ratio (v/VENC) to velocity uncertainty in phase-contrast (PC) MRI and to develop a framework for in vivo voxel-wise uncertainty estimation. Methods: Through-plane 2D PC-MRI of the ascending aorta was acquired using multiple velocity encodings (150, 200, 300 cm/s) and flip angles (0, 5, 15, 20 degrees) to vary v/VENC and SNR. Voxel-wise SNR and velocity uncertainty maps were generated using empirically calibrated phase-noise modeling. Phase-resolved subject-level analyses were performed to quantify the relative contributions of SNR and |v|/VENC to percent velocity uncertainty (%unc). Uncertainty was propagated to flow, stroke volume (SV), and cardiac output (CO). Results: Velocity uncertainty varied substantially across the cardiac cycle and depended on both SNR and |v|/VENC. Across cardiac phases, |v|/VENC accounted for most explained variance in %unc (partial R2=0.666), while SNR provided a smaller but meaningful contribution (partial R2=0.287; full R2=0.909). Near peak systole, SNR contributed more strongly while overall uncertainty remained low. In contrast, diastolic %unc became unstable as velocity approached zero. These effects were most pronounced at low |v|/VENC, where higher VENC settings increased uncertainty despite similar SNR. SV uncertainty ranged from 0.27% to 1.07% across VENCxFA protocols. Conclusion: Velocity uncertainty in PC-MRI depends on both SNR and VENC adequacy in a physiologically phase-dependent manner. Relative uncertainty may become inadequate for precise quantification in low-flow applications, such as diastolic regurgitant jets, despite adequate SNR. Spatiotemporal uncertainty mapping provides a framework for uncertainty-aware PC-MRI acquisition and interpretation.

15
Disentangling Pontine Fiber Geometry and Microstructure in ARSACS Using Advanced MRI

Leppert, I. R.; Benbachir, A.; Campbell, J. S.; Coelho, S.; Feizollah, S.; Nelson, M. C.; Brais, B.; Cocozza, S.; Pike, G. B.; La Piana, R.; Tardif, C. L.

2026-05-28 radiology and imaging 10.64898/2026.05.20.26353196 medRxiv
Top 0.2%
4.4%
Show abstract

Background: Autosomal recessive spastic ataxia of Charlevoix-Saguenay (ARSACS) is a genetic disease characterized by spasticity and ataxia which reflects involvement of the corticospinal tracts (CST) and cerebellum. The primary involvement of the middle cerebellar peduncles (MCP) and transverse pontine fibers (TPF) at the crossing with the CST, and their role in the pathophysiology of the disease, is currently debated. Objectives: Advanced MRI techniques capable of isolating sub-voxel microstructural parameters can test the hypothesis that the MCP and TPF are abnormally large, compressing the CST at their crossing, and potentially impairing CST development. Methods: Tract macro- and micro-structural properties, including axon and tract caliber, axon density and geometry, and myelin content were estimated from diffusion-relaxometry and magnetization transfer imaging. These features were analyzed along segments of the CST, MCP, and TPF of 9 patients and 9 age-matched controls. Results: While the CST showed significant decreases in tract size, axon caliber, and myelination throughout its length compared to controls (p<0.01), the MCP and TPF were relatively unaffected. In our group, neither the MCP nor the pons were enlarged. The proximal MCP showed an increase in axon caliber. Conclusions: The increase in fractional anisotropy and axon density towards the center of the TPF could be driven by geometric confounds related to differences in the relative sizes of the CST and TPF compared to controls. This highlights the importance of investigating tract-specific microstructural profiles, particularly in regions of geometric complexity. The findings confirm the involvement of the CST, with a relatively limited involvement of the MCP and TPF.

16
Multimodal neuroimaging approach for cognitive impairment in Alzheimer disease

Gonzales, M.; Kang, X.; Adamson, M. M.; Chao, S. Z.; Yoon, B. C.

2026-06-06 radiology and imaging 10.64898/2026.06.04.26354924 medRxiv
Top 0.2%
4.4%
Show abstract

PURPOSE: Alzheimer disease (AD) is associated with cognitive impairment, brain atrophy, and elevated amyloid-beta and tau. The study aimed to characterize regional atrophy associated with elevated amyloid-beta and tau, as measured by [18F]florbetapir (FBP) and [18F]flortaucipir (FTP) positron emission tomography (PET), respectively, and determine whether combining PET and atrophy data improves the prediction of cognitive impairment. METHODS: Alzheimer Disease Neuroimaging Initiative data (n = 381) were retrospectively analyzed. PET results were correlated with cortical thickness, gray matter (GM) volumes, Mini-Mental State Examination, and Montreal Cognitive Assessment. Linear/logistic regression and area under the curve (AUC) were used to evaluate for significant correlations and compare performances in distinguishing cognitive impairment, respectively. RESULTS: Incremental loss of cortical thickness and GM volume was observed from FBP-/FTP- (n = 205) to single PET-positive (FBP+/FTP-, n = 133; FBP-/FTP+, n = 5) and FBP+/FTP+ (n = 38) groups, particularly in the temporal and parietal lobes. FBP+/FTP+ showed the most severe cortical thickness loss in the entorhinal cortex, temporal lobe GM atrophy, and cognitive impairment. Adding brain atrophy as the third variable resulted in higher odds ratios and improved AUCs for cognitive impairment, with FBP+/FTP+/temporal GM or entorhinal cortical atrophy+ demonstrating the strongest associations with cognitive impairment. CONCLUSION: A multimodal approach combining PET and MRI may help improve the assessment of cognitive impairment in AD.

17
Short T1 Fraction as a Marker of Myelin Content: Evidence from Postmortem MRI and Histology

Li, C.; Leitner, D.; Liang, Z.; Yakovishina, V.; Ibrahim, M.; Faustin, A.; Wisniewski, T.; Wadghiri, Y. Z.; Ge, Y.; Zhang, J.

2026-06-03 neuroscience 10.64898/2026.05.31.728778 medRxiv
Top 0.2%
3.9%
Show abstract

PurposeTo investigate the short-T1 fraction as a potential biomarker of white matter myelin integrity, using myelin histology as ground truth. MethodsMulti-inversion-time MRI data were acquired from four postmortem brain hemisphere specimens from donors with Alzheimers disease on a clinical 3T scanner, and from five dissected tissue blocks containing white matter hyperintensities (WMHs) on a preclinical 3T system. Short-T1 fraction maps were generated using inverse Laplace transform to isolate short-T1 components and were compared with T2-based myelin water imaging metrics through joint T1-T2 correlation analysis. Short-T1 fraction maps from the tissue blocks were further compared with myelin-stained histology. In addition, in vivo short-T1 fraction data were acquired from two elderly volunteers with WMHs to demonstrate translational feasibility. ResultsPostmortem MRI revealed reduced short-T1 fractions in WMHs. T1-T2 correlation analysis showed that the short-T1 fraction was closely associated with the short-T2 (myelin water) component. Strong correlations were observed between short-T1 fractions and optical densities from both Luxol Fast Blue- and myelin basic protein-stained histological sections, supporting the link between the short-T1 signal and myelin content. Consistent findings were also observed in vivo, where significant reductions in short-T1 fractions were detected within WMHs. ConclusionThe short-T1 fraction correlated with myelin content in postmortem brain white matter, supporting its potential as a clinically translatable biomarker of myelin integrity.

18
A CT-Based Study to Evaluate the Correlation Between Age-Related Cerebral Atrophy and Presenting Neurological Symptoms in Adult Patients: A Retrospective Cross-Sectional Analysis from Gujranwala, Pakistan

Noreen, S.; Tahir, M.; Habib, H.; Akram, H.; Talha, M.

2026-05-25 radiology and imaging 10.64898/2026.05.23.26353940 medRxiv
Top 0.2%
3.1%
Show abstract

Age related cerebral atrophy is one of the most prevalent radiological findings in ageing populations, yet its clinical significance particularly its correlation with specific neurological presenting symptoms remains insufficiently characterised in South Asian contexts. This retrospective cross sectional study was conducted at THQ Hospital Wazirabad and Chattha Hospital, Gujranwala, Pakistan over a six month period, enrolling 66 adult patients ([&ge;]40 years) who underwent non contrast computed tomography (CT) of the brain. CT scans were evaluated for Evans index, ventricular enlargement (graded 1 to 3), cerebral atrophy severity (graded 1 to 3), early ischaemic changes, and the hyperdense vessel sign. Presenting neurological symptoms headache, seizures, slurred speech, ataxia, and numbness were extracted from medical records and correlated with imaging findings using chi square tests, Spearmans rank correlation, and binary logistic regression in SPSS v31.0. The mean patient age was 52.1 to 14.3 years (range 35 83) with a male predominance (72.7%). Moderate to severe atrophy was present in 50.0% of patients. Seizures (74.2%), slurred speech (63.6%), and ataxia (62.1%) were the most prevalent symptoms. Significant positive correlations were found between atrophy grade and age (r = 0.72, p < 0.001), slurred speech (r = 0.48, p < 0.001), ataxia (r = 0.44, p < 0.001), and numbness (r = 0.39, p = 0.001). Headache showed no significant correlation with atrophy severity (p = 0.42). Logistic regression revealed that each one grade increase in atrophy severity raised the odds of motor/speech symptoms by 2.8 fold (95% CI: 1.6 to 4.9, p <0.001), independent of age. These findings support the integration of standardised CT based atrophy reporting into routine radiology practice for older adults, especially in resource limited settings where MRI is not readily accessible.

19
Automated identification of bolus types in modified barium swallow studies using deep learning: a preliminary study

Mao, S.; Sahli, A. J.; Buoy, S. N.; Hutcheson, C.; Gelabert, G. A.; Barbon, C. E. A.; Naser, M. A.; Fuller, C. D.; Brock, K. K.; Hutcheson, K. A.

2026-05-20 radiology and imaging 10.64898/2026.05.16.26353385 medRxiv
Top 0.3%
2.5%
Show abstract

Purpose: Modified Barium Swallow (MBS) studies utilize videofluoroscopy, a dynamic X-ray technique for evaluating swallowing anatomy and physiology. Each MBS exam typically includes multiple bolus trials, often involving different bolus consistencies. Accurate classification of bolus types is essential, as swallowing dynamics, aspiration risks, and residue levels vary with bolus consistency. In this preliminary study, we propose a deep learning-based approach for automated bolus type classification in MBS, aiming to provide a standardized and efficient framework for automated processing of swallowing assessments. Methods: A total of 206 patients (Mean +/- SD age: 60.24 +/- 9.02 years; 89.32% men) underwent MBS examinations, comprising 277 individual MBS studies. The dataset included 2,752 bolus-level video segments, categorized by bolus type as follows: 1,711 liquid (IDDSI 0-3, 62.17%), 521 pudding (IDDSI 4, 18.93%), and 520 solid boluses (IDDSI 7, cookie or cracker, 18.89%). To standardize variable video lengths for the data pipeline, each MBS video was temporally segmented into a fixed-length frame sequence, with shorter videos padded using static frames and longer videos randomly cropped to the target length. We employed an Inflated 3D convolutional neural network to develop the deep learning model. Results: Each video segment contained an average of 273.03 +/- 195.81 frames. On the independent test set, the deep learning model achieved an overall accuracy of 96.13%, and the macro F1-score was 95.05% in classifying food bolus types within MBS videos. Conclusions: The developed AI-based system demonstrated effective automated classification of food bolus types in MBS videos, representing an important step toward fully automated MBS analysis for swallowing efficiency assessment. The AI model reduces the reliance on manual labels, thereby promising to streamline clinical and research workflows.

20
Higher PVS volume in adults born very preterm

Huerter, N. M.; Schmenger, V. S.; Barda, T.; Thalhammer, M.; Schmitz-Koep, B. M.; Menegaux, A.; Daamen, M.; Priller, J.; Decker, A.; Deike, K.; Zimmer, C.; Bartmann, P.; Wolke, D.; Zott, B.; Sorg, C.; Hedderich, D. M.

2026-05-25 radiology and imaging 10.64898/2026.05.23.26353943 medRxiv
Top 0.3%
2.4%
Show abstract

Abstract: BACKGROUND: Perivascular spaces (PVS), visible on brain MRI, contribute to the brain clearance system and are associated with age and neurodegenerative disorders. While lower volumes of PVS in the forebrains white matter and basal ganglia have been also demonstrated in preterm-born neonates, the long-term trajectory of PVS after premature birth remains unclear. This study tests for altered PVS volumes in very preterm/very low birthweight-born (VP/VLBW) adults compared to full-term controls and explores potential associations with cognitive performance. METHODS: PVS were assessed on T2-weighted MRI from 97 VP/VLBW and 89 full-term (FT) subjects at 26 years from the prospective, population-based Bavarian Longitudinal Study. PVS volume and count was based on automated nnU-Net-based segmentation. Regional PVS volumes were normalized by corresponding regional parenchyma volumes. Cognitive performance was assessed by the Wechsler Adult Intelligence Scale. MANCOVA was used for PVS group comparisons, Spearman rank correlations for testing PVS relationships with birth variables and cognitive scores. RESULTS: VP/VLBW-born adults showed significantly higher normalized PVS volumes in bilateral basal ganglia (p < 0.001, partial eta-squared = 0.096) and insula-related white matter (p = 0.001, partial eta-squared = 0.057). In the basal ganglia, higher PVS volumes were negatively correlated with gestational age (rho = -0.223, p = 0.030) and positively correlated with the Intensity of Neonatal Treatment Index (rho = 0.222, p = 0.030) in the VP/VLBW group. PVS volume was not associated with IQ scores. CONCLUSION: We demonstrate region-specific alterations of perivascular spaces in VP/VLBW-born adults. Data suggest that prematurity has lasting impact on the PVS.